Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THYM rs700969 chr9:98501529 G/A 8.48E-6 114 30.35 49.83 39.75 KM Plot
THYM rs700970 chr9:98501310 G/A 7.12E-5 115 34.87 51.23 38.33 KM Plot
THYM rs7022386 chr9:97255100 G/A 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs7024607 chr9:97155038 C/T 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs7026241 chr9:97238134 C/G 8.1E-5 119 40.67 44.3 17.03 KM Plot
THYM rs7027704 chr9:97225998 C/T 8.87E-5 118 40.67 45.87 17.03 KM Plot
THYM rs7027860 chr9:97256233 C/T 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs7028388 chr9:97256618 C/G 7.08E-5 119 39.75 45.87 17.03 KM Plot
THYM rs7030326 chr9:97165108 A/G 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs7030967 chr9:97209976 T/A 8.1E-5 119 40.67 44.3 17.03 KM Plot
THYM rs7031564 chr9:98525125 C/A 7.67E-7 116 38.23 51.53 34.87 KM Plot
THYM rs7034153 chr9:97215324 A/G 8.1E-5 119 17.03 44.3 40.67 KM Plot
THYM rs7036341 chr9:97103409 G/A 0.000105 116 41.77 42.73 17.03 KM Plot
THYM rs7036474 chr9:97191379 C/T 7.78E-5 119 41.77 40.43 17.03 KM Plot
THYM rs7037298 chr9:97216163 G/T 8.1E-5 119 40.67 44.3 17.03 KM Plot